I've never embedded a website before, but I know Flash movies have to implemented in two different ways (just like AJAX) because IE and FF have completely different ways of handling it.
For IE You insert <object> tags like this...
Code:
<object attributes="blahblahNotRelevantToYou">
<param attribute="something">
<param attribute="something">
<param attribute="something">
<param attribute="something">
</object>
And it's the parameters that define everything for IE, and I think that's what you may be missing. Again, for Flash you then insert at the end of the param tags an <embed> with all the info (yes, a second time just for FF).
Code:
<object attributes="blahblahNotRelevantToYou">
<param attribute="something">
<param attribute="something">
<param attribute="something">
<param attribute="something">
<embed attributes="OhMyGoshALotOfAttributesAndValuesInOneBigLongMess" />
</object>
And it sounds like you have the same issue. FF works because it's getting the info from the embed tag, but IE requires valid (X)HTML for this (the W3C considers this an illegal use of the embed tag). So IE requires everything set a second time in the param tags.
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<OBJECT> tag in IE doesn't work
